Full metadata record
DC Field | Value | Language |
---|---|---|
dc.contributor.author | 김덕수 | - |
dc.date.accessioned | 2016-10-12T02:23:23Z | - |
dc.date.available | 2016-10-12T02:23:23Z | - |
dc.date.issued | 2015-04 | - |
dc.identifier.citation | NUCLEIC ACIDS RESEARCH, v. 43, NO W1, Page. 413-418 | en_US |
dc.identifier.issn | 0305-1048 | - |
dc.identifier.issn | 1362-4962 | - |
dc.identifier.uri | http://nar.oxfordjournals.org/content/43/W1/W413 | - |
dc.identifier.uri | http://hdl.handle.net/20.500.11754/23769 | - |
dc.description.abstract | Molecular cavities, which include voids and channels, are critical for molecular function. We present a webserver, BetaCavityWeb, which computes these cavities for a given molecular structure and a given spherical probe, and reports their geometrical properties: volume, boundary area, buried area, etc. The server's algorithms are based on the Voronoi diagram of atoms and its derivative construct: the beta-complex. The correctness of the computed result and computational efficiency are both mathematically guaranteed. BetaCavityWeb is freely accessible at the Voronoi Diagram Research Center (VDRC) (http://voronoi.hanyang.ac.kr/ betacavityweb). | en_US |
dc.description.sponsorship | NRF [2012R1A2A1A05026395 to Kim, Cho, Lee and Kim]; [2011-0030030 to Ryu], Korea; Grant-in-Aid for Scientific Research [24650015, 24360039 to Sugihara] of MEXT, Japan. Funding for open access charge: NRF [2012R1A2A1A05026395], Korea. | en_US |
dc.language.iso | en | en_US |
dc.publisher | OXFORD UNIV PRESS | en_US |
dc.subject | CRYSTAL-STRUCTURE | en_US |
dc.subject | VORONOI-DIAGRAM | en_US |
dc.subject | QUASI-TRIANGULATION | en_US |
dc.subject | BETA-COMPLEXES | en_US |
dc.subject | PROTEIN | en_US |
dc.subject | COMPUTATION | en_US |
dc.subject | CAVITIES | en_US |
dc.subject | TUNNELS | en_US |
dc.subject | MACROMOLECULES | en_US |
dc.subject | IDENTIFICATION | en_US |
dc.title | BetaCavityWeb: a webserver for molecular voids and channels | en_US |
dc.type | Article | en_US |
dc.relation.no | W1 | - |
dc.relation.volume | 43 | - |
dc.identifier.doi | 10.1093/nar/gkv360 | - |
dc.relation.page | 413-418 | - |
dc.relation.journal | NUCLEIC ACIDS RESEARCH | - |
dc.contributor.googleauthor | Kim, Jae-Kwan | - |
dc.contributor.googleauthor | Cho, Youngsong | - |
dc.contributor.googleauthor | Lee, Mokwon | - |
dc.contributor.googleauthor | Laskowski, Roman A. | - |
dc.contributor.googleauthor | Ryu, Seong Eon | - |
dc.contributor.googleauthor | Sugihara, Kokichi | - |
dc.contributor.googleauthor | Kim, Deok-Soo | - |
dc.relation.code | 2015001397 | - |
dc.sector.campus | S | - |
dc.sector.daehak | COLLEGE OF ENGINEERING[S] | - |
dc.sector.department | DIVISION OF MECHANICAL ENGINEERING | - |
dc.identifier.pid | dskim | - |
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